AMTR_s00077p00164670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.174

Description : Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.MadA myosin adaptor protein


Gene families : OG0001542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00164670
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Als_g03462 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27239 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04515 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g40310.1 LOC_Os05g40310 myosin adaptor protein (MadA) 0.06 OrthoFinder output from all 47 species
Msp_g10133 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57849 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14885 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g074800.3.1 Solyc10g074800 myosin adaptor protein (MadA) 0.04 OrthoFinder output from all 47 species
Zm00001e020876_P003 Zm00001e020876 myosin adaptor protein (MadA) 0.01 OrthoFinder output from all 47 species
Zm00001e027306_P005 Zm00001e027306 myosin adaptor protein (MadA) 0.03 OrthoFinder output from all 47 species
Zm00001e031959_P001 Zm00001e031959 myosin adaptor protein (MadA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!