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  5. AMTR_s00078p00178260

AMTR_s00078p00178260 (RFL1,...)


Aliases : RFL1, evm_27.TU.AmTr_v1.0_scaffold00078.173

No description available


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00178260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00183570 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00183610 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00104p00152930 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00142p00041790 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G63360 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Cba_g57175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015167001 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01016962001 RPS5 Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
GSVIVT01020286001 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
Gb_12853 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_12854 RPS2 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_12858 RPS2 Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
Gb_16713 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.03 OrthoFinder output from all 47 species
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10322161g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_168565g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9565901g0010 No alias Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
Pp3c19_2470V3.1 Pp3c19_2470 NB-ARC domain-containing disease resistance protein 0.02 OrthoFinder output from all 47 species
Smo108463 No alias Probable disease resistance protein RPP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc06g048910.2.1 Solyc06g048910 Disease resistance protein At4g27190 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g005520.1.1 RPS5, Solyc12g005520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 33 124
No external refs found!