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  5. AMTR_s00078p00183570

AMTR_s00078p00183570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.182

Description : Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00183570
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00032p00050560 evm_27.TU.AmTr_v1... Putative disease resistance protein At5g05400... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00089750 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00106150 evm_27.TU.AmTr_v1... Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00106420 evm_27.TU.AmTr_v1... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00178260 RFL1,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00096p00056370 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.03 OrthoFinder output from all 47 species
AT1G52660 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 OrthoFinder output from all 47 species
AT3G15700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G63020 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Aspi01Gene55099.t1 ZAR1, Aspi01Gene55099 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56659.t1 Aspi01Gene56659 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G123500.1 RPS5, Ceric.01G123500 not classified & original description: pacid=50592013... 0.03 OrthoFinder output from all 47 species
GSVIVT01017267001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01020293001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01300 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_04767 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_08717 RPS5 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_12853 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_12854 RPS2 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_16713 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.03 OrthoFinder output from all 47 species
Gb_22369 RPS5 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72680.1 RPS5, LOC_Os01g72680 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g10910.1 RPS2, LOC_Os03g10910 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g43440.1 RPS2, LOC_Os04g43440 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10426603g0010 No alias Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
MA_10432620g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432804g0010 No alias Putative disease resistance protein At4g10780... 0.04 OrthoFinder output from all 47 species
MA_10436071g0010 No alias Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
MA_112657g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_201159g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_40435g0010 No alias Probable disease resistance protein At1g61310... 0.02 OrthoFinder output from all 47 species
MA_5551624g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_562728g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_690530g0010 No alias Probable disease resistance protein At5g43730... 0.02 OrthoFinder output from all 47 species
MA_733g0010 No alias Probable disease resistance protein At1g15890... 0.02 OrthoFinder output from all 47 species
MA_781140g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7954986g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g09150.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g09210.1 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
Msp_g16234 ADR1-L2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo105865 No alias Probable disease resistance protein At4g33300... 0.03 OrthoFinder output from all 47 species
Solyc02g037540.3.1 Solyc02g037540 Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
Solyc06g048910.2.1 Solyc06g048910 Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g076440.1.1 Solyc10g076440 Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 163 354
No external refs found!