Aliases : JAG, evm_27.TU.AmTr_v1.0_scaffold00079.40
Description : Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica
Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00079p00109960 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G13400 | JGL, NUB | C2H2 and C2HC zinc fingers superfamily protein | 0.11 | OrthoFinder output from all 47 species | |
| AT2G42410 | ZFP11, ATZFP11 | zinc finger protein 11 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G23130 | SUP, FLO10, FON1 | C2H2 and C2HC zinc fingers superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G23140 | URO | C2H2 and C2HC zinc fingers superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G06650 | GIS2 | C2H2 and C2HC zinc fingers superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g009388 | RAB, RBE | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024673 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059756 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g119957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19090 | ZFP1, ATZFP1 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07073 | ZFP1, ATZFP1 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20041 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g12668 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g21563 | ZFP1, ATZFP1 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene03060.t1 | ZFP10, ATZFP10,... | C2H2 subclass ZFP transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene39584.t1 | ZFP3, Aspi01Gene39584 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G102100.1 | Ceric.05G102100 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G034400.1 | ZFP1, ATZFP1,... | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G024000.1 | Ceric.29G024000 | C2H2 subclass ZFP transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.32G009700.1 | Ceric.32G009700 | C2H2 subclass ZFP transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g15821 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g00494 | RAB, RBE | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g31422 | ZFP6 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07516 | ZFP3 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08072 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13421 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011610001 | ZFP4 | No description available | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016493001 | RAB, RBE | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g01090.1 | RAB, RBE, LOC_Os02g01090 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g36650.1 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g40300.1 | ZFP7, LOC_Os07g40300 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_10430024g0010 | No alias | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_57615g0010 | ZFP1, ATZFP1 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10324 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11810 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g00352 | ZFP1, ATZFP1 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g05843 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25929 | TAC1 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19764 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g11111 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000637 | RAB, RBE | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g41679 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g060420.2.1 | ZFP6, Solyc01g060420 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g014540.3.1 | ZFP4, Solyc04g014540 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g009380.4.1 | JAG, Solyc05g009380 | Zinc finger protein JAGGED OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g061870.3.1 | Solyc09g061870 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g011890.2.1 | ZFP4, Solyc11g011890 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28866 | ZFP10, ATZFP10 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008019_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e009853_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025728_P002 | JAG, Zm00001e025728 | Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e034219_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034220_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034221_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e040612_P001 | ZFP11, ATZFP11,... | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e040940_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
