1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00079p00147910

AMTR_s00079p00147910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.64

Description : Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana


Gene families : OG0000445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000445_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00147910
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT5G50740 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g075931 FP3, ATFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087310 CCH not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0153.g053481 No alias not classified & original description: CDS=1-915 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054599 No alias not classified & original description: CDS=226-915 0.03 OrthoFinder output from all 47 species
Cba_g21783 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G096800.1 Ceric.02G096800 not classified & original description: pacid=50585183... 0.02 OrthoFinder output from all 47 species
Ceric.32G067500.1 Ceric.32G067500 not classified & original description: pacid=50598536... 0.03 OrthoFinder output from all 47 species
Dcu_g22795 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36197 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26224 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57009 FP3, ATFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24254 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04702 FP3, ATFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005624 No alias not classified & original description: CDS=567-1340 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017687 No alias not classified & original description: CDS=213-803 0.02 OrthoFinder output from all 47 species
Sam_g19754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g015030.4.1 Solyc04g015030 Heavy metal-associated isoprenylated plant protein 7... 0.03 OrthoFinder output from all 47 species
Spa_g06960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040759_P004 FP3, ATFP3,... Heavy metal-associated isoprenylated plant protein 7... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 27 83
IPR006121 HMA_dom 130 193
No external refs found!