1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00081p00168190

AMTR_s00081p00168190 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00081.74

No description available


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00081p00168190
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00048530 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g09453 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g58735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71508.t1 Aspi01Gene71508 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_18731 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g45590.1 LOC_Os04g45590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07940.1 LOC_Os05g07940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10562 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428538g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_15220g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_814986g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9349606g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9550254g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g18130.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005398 No alias not classified & original description: CDS=1-540 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024374 No alias not classified & original description: CDS=151-678 0.03 OrthoFinder output from all 47 species
Sam_g11459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026712_P002 Zm00001e026712 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR025870 Glyoxalase-like_dom 19 134
No external refs found!