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  5. AMTR_s00084p00079370

AMTR_s00084p00079370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00084.20

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,3-galactosyltransferase


Gene families : OG0000384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00084p00079370
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00156p00023720 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G32930 No alias Galactosyltransferase family protein 0.04 OrthoFinder output from all 47 species
Adi_g011619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021305 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Adi_g060233 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Adi_g060258 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Aev_g10721 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Aev_g13844 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Aev_g20657 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Ala_g02058 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Ala_g13205 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.04 OrthoFinder output from all 47 species
Als_g31831 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Aop_g12865 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Aop_g15216 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63208.t1 Aspi01Gene63208 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034521 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.04 OrthoFinder output from all 47 species
Dac_g03799 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.04 OrthoFinder output from all 47 species
Dac_g18581 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Dde_g07131 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Dde_g10764 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01012721001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01019685001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
LOC_Os01g65590.1 LOC_Os01g65590 AGP beta-1,3-galactosyltransferase 0.02 OrthoFinder output from all 47 species
LOC_Os02g06840.1 LOC_Os02g06840 AGP beta-1,3-galactosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os06g46570.1 LOC_Os06g46570 AGP beta-1,3-galactosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os08g02370.1 LOC_Os08g02370 AGP beta-1,3-galactosyltransferase 0.08 OrthoFinder output from all 47 species
LOC_Os09g27950.1 LOC_Os09g27950 AGP beta-1,3-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Len_g18249 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06965 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Msp_g07390 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Msp_g14336 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g24861 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Ore_g41871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16430 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Pir_g18989 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017980 No alias not classified & original description: CDS=21-1322 0.04 OrthoFinder output from all 47 species
Sam_g10464 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.04 OrthoFinder output from all 47 species
Sam_g50633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g00958 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Spa_g52541 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.07 OrthoFinder output from all 47 species
Tin_g06533 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e029206_P001 Zm00001e029206 AGP beta-1,3-galactosyltransferase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
MF GO:0008378 galactosyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 153 350
IPR025298 DUF4094 19 113
No external refs found!