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  5. AMTR_s00084p00178510

AMTR_s00084p00178510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00084.49

Description : Uncharacterized protein At3g28850 OS=Arabidopsis thaliana


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00084p00178510
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g007759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34169.t1 Aspi01Gene34169 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40722.t2 Aspi01Gene40722 actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G002600.1 Ceric.28G002600 not classified & original description: pacid=50570165... 0.03 OrthoFinder output from all 47 species
Ceric.38G045300.1 Ceric.38G045300 not classified & original description: pacid=50579562... 0.04 OrthoFinder output from all 47 species
Dac_g15917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011378001 No alias Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01022568001 No alias Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024682001 No alias Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g51370.1 LOC_Os02g51370 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os03g07470.1 LOC_Os03g07470 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g08448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g04860.1 No alias actin filament-bundling factor (THRUMIN) 0.02 OrthoFinder output from all 47 species
Pir_g06803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g087850.1.1 Solyc02g087850 Uncharacterized protein At3g28850 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g10159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027223_P001 Zm00001e027223 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0015035 protein-disulfide reductase activity IEA Interproscan
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 181 245
No external refs found!