1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00085p00068720

AMTR_s00085p00068720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00085.29

No description available


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00085p00068720
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G10750 No alias Protein of Unknown Function (DUF239) 0.04 OrthoFinder output from all 47 species
AT1G23340 No alias Protein of Unknown Function (DUF239) 0.04 OrthoFinder output from all 47 species
AT1G55360 No alias Protein of Unknown Function (DUF239) 0.06 OrthoFinder output from all 47 species
AT3G13510 No alias Protein of Unknown Function (DUF239) 0.06 OrthoFinder output from all 47 species
AT4G23350 No alias Protein of Unknown Function (DUF239) 0.05 OrthoFinder output from all 47 species
AT4G23390 No alias Protein of Unknown Function (DUF239) 0.02 OrthoFinder output from all 47 species
AT5G18460 No alias Protein of Unknown Function (DUF239) 0.03 OrthoFinder output from all 47 species
AT5G50150 No alias Protein of Unknown Function (DUF239) 0.04 OrthoFinder output from all 47 species
Adi_g030046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g072910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0109.g045324 No alias not classified & original description: CDS=108-1337 0.04 OrthoFinder output from all 47 species
Azfi_s0280.g062318 No alias not classified & original description: CDS=377-1795 0.04 OrthoFinder output from all 47 species
Cba_g73343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G056300.1 Ceric.26G056300 not classified & original description: pacid=50600342... 0.02 OrthoFinder output from all 47 species
Dde_g01512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007693001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01019797001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026336001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01026924001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01026932001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01035338001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_36043 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g36660.1 LOC_Os01g36660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g55210.1 LOC_Os02g55210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g28000.1 LOC_Os06g28000 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g10530.1 LOC_Os07g10530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g24050.1 LOC_Os07g24050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g18140.1 LOC_Os11g18140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_109497g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_1134g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g19342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo438522 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc05g005010.3.1 Solyc05g005010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g070080.1.1 Solyc11g070080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g070090.1.1 Solyc11g070090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g50717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006081_P001 Zm00001e006081 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e016772_P001 Zm00001e016772 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020747_P001 Zm00001e020747 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025875_P001 Zm00001e025875 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033077_P002 Zm00001e033077 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004314 Neprosin 5 127
No external refs found!