1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00085p00099740

AMTR_s00085p00099740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00085.60

No description available


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00085p00099740
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Adi_g009412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G005900.1 Ceric.28G005900 not classified & original description: pacid=50570573... 0.03 OrthoFinder output from all 47 species
Gb_05096 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_38930 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g00411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434855g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g00391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g54924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022828 No alias not classified & original description: CDS=181-576 0.02 OrthoFinder output from all 47 species
Smo74840 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g066810.4.1 Solyc01g066810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g109710.3.1 RD2, Solyc01g109710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 4 158
No external refs found!