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  5. AMTR_s00085p00136920

AMTR_s00085p00136920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00085.87

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00085p00136920

Target Alias Description ECC score Gene Family Method Actions
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Ala_g19012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32850 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006483001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01020980001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
Gb_04264 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10426555g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433845g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10435505g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_908452g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Nbi_g23825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_30410V3.1 Pp3c4_30410 Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Solyc01g113620.3.1 Solyc01g113620 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc11g011350.3.1 Solyc11g011350 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Tin_g07542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 3 138
IPR002182 NB-ARC 185 452
No external refs found!