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  5. AMTR_s00086p00066190

AMTR_s00086p00066190 (SHR, SGR7,...)


Aliases : SHR, SGR7, evm_27.TU.AmTr_v1.0_scaffold00086.29

Description : External stimuli response.gravity.sensing and signalling.SHR transcription factor


Gene families : OG0003562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003562_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00086p00066190
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT4G37650 SHR, SGR7 GRAS family transcription factor 0.05 OrthoFinder output from all 47 species
Aev_g06030 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
Aob_g17904 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17700.t1 SHR, SGR7,... GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29734 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000107001 SHR, SGR7 External stimuli response.gravity.sensing and... 0.04 OrthoFinder output from all 47 species
Len_g46830 SHR, SGR7 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33336 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.04 OrthoFinder output from all 47 species
Nbi_g15022 SHR, SGR7 gravity signalling transcription factor *(SHR) &... 0.02 OrthoFinder output from all 47 species
Solyc02g092370.1.1 SHR, SGR7, Solyc02g092370 transcription factor (GRAS). SHR gravity signalling... 0.03 OrthoFinder output from all 47 species
Zm00001e002085_P001 SHR, SGR7, Zm00001e002085 transcription factor (GRAS). SHR gravity signalling... 0.04 OrthoFinder output from all 47 species
Zm00001e035411_P001 SHR, SGR7, Zm00001e035411 transcription factor (GRAS). SHR gravity signalling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 31 404
No external refs found!