AMTR_s00088p00167430 (PUM7, APUM7,...)

Aliases : PUM7, APUM7, evm_27.TU.AmTr_v1.0_scaffold00088.140

Description : Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00088p00167430

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008180	APUM12, PUM12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03238	APUM12, PUM12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07070	APUM12, PUM12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os12g31000.1	PUM7, APUM7,...	Putative pumilio homolog 7, chloroplastic OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	478	503
IPR001313	Pumilio_RNA-bd_rpt	359	389

External Links

No external refs found!