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  5. AMTR_s00089p00061940

AMTR_s00089p00061940 (UBC10,...)


Aliases : UBC10, evm_27.TU.AmTr_v1.0_scaffold00089.23

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.UBC-subclass-6 conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00089p00061940

Target Alias Description ECC score Gene Family Method Actions
AT5G56150 UBC30 ubiquitin-conjugating enzyme 30 0.02 OrthoFinder output from all 47 species
Adi_g015507 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029541 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32602 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.06 OrthoFinder output from all 47 species
Als_g10989 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39862 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46782 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05731 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09895 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29033.t1 ATUBC8, UBC8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71490 ATUBC11, UBC11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G022100.1 UBC10, Ceric.19G022100 E2 MUB ubiquitin-conjugating enzyme & original... 0.05 OrthoFinder output from all 47 species
Gb_39877 ATUBC11, UBC11 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Lfl_g05219 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18025 ATUBC8, UBC8 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23404 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31742 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
MA_725251g0010 UBC10 Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp5g21800.1 UBC10 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Nbi_g03936 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02103 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55798 ATUBC11, UBC11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00527 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Smo233935 ATUBC11, UBC11 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Solyc06g007510.3.1 UBC10, Solyc06g007510 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Spa_g24617 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028859_P002 ATUBC11, UBC11,... conjugation E2 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!