AMTR_s00092p00137320 (RPS2,...)

Aliases : RPS2, evm_27.TU.AmTr_v1.0_scaffold00092.103

Description : Disease resistance protein At4g27190 OS=Arabidopsis thaliana

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00092p00137320

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00050p00214410	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT1G62630	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
GSVIVT01014161001	No alias	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01017136001	No alias	Probable disease resistance protein At1g61190...	0.04	OrthoFinder output from all 47 species
GSVIVT01020292001	RPS5	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_12858	RPS2	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
Gb_18201	No alias	Probable disease resistance protein At1g61180...	0.03	OrthoFinder output from all 47 species
Gb_24897	No alias	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species
MA_10322161g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_14682g0010	No alias	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
MA_781140g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Mp3g09180.1	No alias	Probable disease resistance protein At4g27220...	0.04	OrthoFinder output from all 47 species
Mp3g09230.1	ADR1-L1	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Smo110652	No alias	Probable disease resistance protein At1g61310...	0.04	OrthoFinder output from all 47 species
Solyc11g007790.1.1	Solyc11g007790	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	158	427

External Links

No external refs found!

AMTR_s00092p00137320 (RPS2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation