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  5. AMTR_s00096p00056370

AMTR_s00096p00056370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00096.26

No description available


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00096p00056370

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00252340 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00183570 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00133980 RFL1,... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.02 OrthoFinder output from all 47 species
Aev_g22566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G123500.1 RPS5, Ceric.01G123500 not classified & original description: pacid=50592013... 0.07 OrthoFinder output from all 47 species
Gb_12854 RPS2 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10274199g0010 RFL1 Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10431079g0020 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10432804g0010 No alias Putative disease resistance protein At4g10780... 0.03 OrthoFinder output from all 47 species
MA_159548g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_5551624g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_562728g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g09210.1 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
Solyc06g048910.2.1 Solyc06g048910 Disease resistance protein At4g27190 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc08g007250.3.1 Solyc08g007250 Disease resistance protein At4g27190 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc11g007790.1.1 Solyc11g007790 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA

No InterPro domains available for this sequence

No external refs found!