Aliases : AtMYB98, MYB98, evm_27.TU.AmTr_v1.0_scaffold00096.31
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00096p00076220 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00225600 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G69560 | LOF2, MYB105, ATMYB105 | myb domain protein 105 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G27785 | PGA37, ATMYB118, MYB118 | myb domain protein 118 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G50060 | MYB77 | myb domain protein 77 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G18770 | AtMYB98, MYB98 | myb domain protein 98 | 0.04 | OrthoFinder output from all 47 species | |
| AT4G37260 | MYB73, ATMYB73 | myb domain protein 73 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G17800 | MYB56, AtMYB56 | myb domain protein 56 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G40360 | MYB115, AtMYB115 | myb domain protein 115 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059961 | MYB70, AtMYB70 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g01523 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39348 | MYB3R-1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14437 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14847.t1 | MYB70, AtMYB70,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0103.g044681 | BW52, ATMYB52, MYB52 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0105.g044929 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0243.g059882 | AtMYB117, LOF1, MYB117 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1025.g095454 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: CDS=1-468 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s3609.g116385 | MYB73, ATMYB73 | not classified & original description: CDS=1-897 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g39034 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G075000.1 | MYB56, AtMYB56,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G036500.1 | MYB56, AtMYB56,... | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Cre09.g399067 | AtMYB109, MYB109 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02281 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009566001 | MYB70, AtMYB70 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020038001 | MYB88, AtMYB88 | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g74590.1 | MYBR1, MYB44,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g08590.1 | LOC_Os04g08590 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g10130.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g07610.1 | AtMYB98, MYB98,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_34970g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Mp4g09880.1 | MYB3R-3, AtMYB3R3 | transcription factor (MYB) | 0.01 | OrthoFinder output from all 47 species | |
| Mp8g11870.1 | AtMYB117, LOF1, MYB117 | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33238 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g44188 | ATMYB3R5, MYB3R-5 | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g07324 | MYB77 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g08134 | MYB3R-1,... | R1R2R3-MYB transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g12037 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g12608 | ATMYB3R5, MYB3R-5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g27096 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08288 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019382 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021926 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g079360.1.1 | MYB77, Solyc04g079360 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g076840.3.1 | ATMYB119,... | transcription factor (MYB) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g24569 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013910_P001 | MYB77, Zm00001e013910 | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
