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  5. AMTR_s00099p00016470

AMTR_s00099p00016470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.3

Description : Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00016470

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.06 OrthoFinder output from all 47 species
AMTR_s00050p00214060 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00062p00106420 evm_27.TU.AmTr_v1... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00062p00146080 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00177570 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00101p00133980 RFL1,... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.07 OrthoFinder output from all 47 species
AMTR_s00243p00014580 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00771p00010380 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
AT1G12280 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G52660 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT1G61190 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G63350 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G43740 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Aev_g36455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56659.t1 Aspi01Gene56659 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063388 No alias not classified & original description: CDS=385-3447 0.03 OrthoFinder output from all 47 species
GSVIVT01014161001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01014599001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017229001 RPS5 Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020292001 RPS5 Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01020293001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_15877 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.04 OrthoFinder output from all 47 species
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_24897 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
Gb_37091 No alias Probable disease resistance protein At1g15890... 0.08 OrthoFinder output from all 47 species
LOC_Os03g14900.1 LOC_Os03g14900 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g14060.1 LOC_Os09g14060 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g14100.1 RPS2, LOC_Os09g14100 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g36410.1 RPS5, LOC_Os11g36410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g23441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10244735g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10322161g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10436071g0020 RPS5 Probable disease resistance protein At4g27220... 0.04 OrthoFinder output from all 47 species
MA_10437210g0010 No alias Probable disease resistance protein At5g43730... 0.03 OrthoFinder output from all 47 species
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
MA_13844g0010 RPS5 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_178357g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_31961g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_355252g0010 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_399969g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_40435g0010 No alias Probable disease resistance protein At1g61310... 0.04 OrthoFinder output from all 47 species
MA_44026g0010 RPS5 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_5216516g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_53162g0020 RPS2 Probable disease resistance protein At5g43740... 0.03 OrthoFinder output from all 47 species
MA_55265g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_5551624g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6456900g0010 RPS2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_690530g0010 No alias Probable disease resistance protein At5g43730... 0.04 OrthoFinder output from all 47 species
MA_781140g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7833161g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_91246g0010 No alias Probable disease resistance protein At1g61190... 0.03 OrthoFinder output from all 47 species
MA_9495285g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g09200.1 ADR1-L1 Probable disease resistance protein At4g33300... 0.02 OrthoFinder output from all 47 species
Pir_g33523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo108463 No alias Probable disease resistance protein RPP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc06g048910.2.1 Solyc06g048910 Disease resistance protein At4g27190 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc08g013970.3.1 Solyc08g013970 Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
Solyc11g007790.1.1 Solyc11g007790 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Tin_g16808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 2 142
No external refs found!