AMTR_s00099p00072730 (MEF21,...)


Aliases : MEF21, evm_27.TU.AmTr_v1.0_scaffold00099.52

Description : Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00072730

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.04 OrthoFinder output from all 47 species
AMTR_s00111p00107400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Adi_g019220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07837 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02808 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24003.t1 OTP84, Aspi01Gene24003 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24967.t1 Aspi01Gene24967 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27806.t1 CRR2, Aspi01Gene27806 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29787.t1 Aspi01Gene29787 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29888.t1 Aspi01Gene29888 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34780.t1 Aspi01Gene34780 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47602.t1 Aspi01Gene47602 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60948.t1 OTP84, Aspi01Gene60948 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65890.t1 Aspi01Gene65890 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0083.g038826 No alias not classified & original description: CDS=1-2151 0.03 OrthoFinder output from all 47 species
Cba_g04726 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13534 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20751 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20779 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29689 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09752 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427854g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Msp_g03182 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04385 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22344 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23174 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22860 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30084 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30607 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32978 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12706 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18089 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53964 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002764 No alias not classified & original description: CDS=1-2754 0.02 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Spa_g12945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20297 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44783 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 211 239
IPR002885 Pentatricopeptide_repeat 77 100
IPR002885 Pentatricopeptide_repeat 282 306
IPR002885 Pentatricopeptide_repeat 108 135
No external refs found!