Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.40
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL30 component
Gene families : OG0000968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000968_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00101p00066400 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g019990 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g104467 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03904 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23120 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G042300.1 | Ceric.31G042300 | component *(eL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06686 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01022191001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13527 | No alias | component RPL30 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g16890.1 | LOC_Os01g16890 | component RPL30 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| MA_6354g0010 | No alias | component RPL30 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g01690.1 | No alias | component RPL30 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g33788 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo19071 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g072660.4.1 | Solyc04g072660 | component RPL30 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g071490.2.1 | Solyc11g071490 | component RPL30 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00831 | No alias | component *(eL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | HCCA |
| MF | GO:0004579 | dolichyl-diphosphooligosaccharide-protein glycotransferase activity | IEP | HCCA |
| MF | GO:0005496 | steroid binding | IEP | HCCA |
| CC | GO:0005740 | mitochondrial envelope | IEP | HCCA |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009060 | aerobic respiration | IEP | HCCA |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | HCCA |
| BP | GO:0019646 | aerobic electron transport chain | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
| CC | GO:0031967 | organelle envelope | IEP | HCCA |
| CC | GO:0031975 | envelope | IEP | HCCA |
| MF | GO:0032934 | sterol binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| CC | GO:0045275 | respiratory chain complex III | IEP | HCCA |
| BP | GO:0045333 | cellular respiration | IEP | HCCA |
| CC | GO:0070069 | cytochrome complex | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| CC | GO:0098803 | respiratory chain complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1902495 | transmembrane transporter complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| CC | GO:1990351 | transporter complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 13 | 105 |
| No external refs found! |
