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  5. AMTR_s00101p00150740

AMTR_s00101p00150740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.124

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00101p00150740

Target Alias Description ECC score Gene Family Method Actions
Ala_g01843 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032789001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os03g15440.1 LOC_Os03g15440 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07120.1 LOC_Os05g07120 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37290.1 BHLH32, ATAIG1,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os09g24490.1 LOC_Os09g24490 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g05533 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21895 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g095980.3.1 Solyc03g095980 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc05g009880.3.1 Solyc05g009880 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Tin_g08301 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001119_P001 Zm00001e001119 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e009812_P001 Zm00001e009812 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e016835_P001 Zm00001e016835 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e022445_P001 Zm00001e022445 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034395_P001 Zm00001e034395 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 80 126
No external refs found!