Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.138
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component
Gene families : OG0002752 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002752_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00101p00163380 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G26850 | No alias | F-box family protein | 0.14 | OrthoFinder output from all 47 species | |
| Cba_g03196 | No alias | substrate adaptor of SCF E3 ubiquitin ligase complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01621 | No alias | substrate adaptor of SCF E3 ubiquitin ligase complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02757 | No alias | substrate adaptor of SCF E3 ubiquitin ligase complex &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037337001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g17390.1 | LOC_Os01g17390 | component FBX of SCF E3 ubiquitin ligase complex | 0.07 | OrthoFinder output from all 47 species | |
| MA_50439g0010 | No alias | component FBX of SCF E3 ubiquitin ligase complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19821 | No alias | substrate adaptor of SCF E3 ubiquitin ligase complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g065000.2.1 | Solyc11g065000 | component FBX of SCF E3 ubiquitin ligase complex | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e017397_P001 | Zm00001e017397 | component FBX of SCF E3 ubiquitin ligase complex | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
| BP | GO:0006825 | copper ion transport | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0030258 | lipid modification | IEP | HCCA |
| BP | GO:0030259 | lipid glycosylation | IEP | HCCA |
| BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
| BP | GO:0032502 | developmental process | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0035434 | copper ion transmembrane transport | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0048856 | anatomical structure development | IEP | HCCA |
| MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
