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  5. AMTR_s00103p00026300

AMTR_s00103p00026300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.8

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.WDR5 component


Gene families : OG0001739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00026300

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000378.20 No alias Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020902.59 No alias Transcription initiation factor TFIID subunit 5... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 16 49
IPR001680 WD40_repeat 142 180
IPR001680 WD40_repeat 197 223
IPR001680 WD40_repeat 227 268
IPR001680 WD40_repeat 63 95
IPR001680 WD40_repeat 100 137
IPR001680 WD40_repeat 274 311
No external refs found!