AMTR_s00103p00118930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.71

No description available


Gene families : OG0001567 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001567_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00118930
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT2G26520 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g30965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25674.t1 Aspi01Gene25674 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G031500.1 Ceric.18G031500 not classified & original description: pacid=50621765... 0.04 OrthoFinder output from all 47 species
Dac_g24869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_13439 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g18596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_133281g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_460378g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_83232g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g43725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28925 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17811 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g015540.1.1 Solyc04g015540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g16421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!