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  5. AMTR_s00106p00019920

AMTR_s00106p00019920 (ATSUS3, SUS3,...)


Aliases : ATSUS3, SUS3, evm_27.TU.AmTr_v1.0_scaffold00106.5

Description : Carbohydrate metabolism.sucrose metabolism.degradation.sucrose synthase


Gene families : OG0001258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00019920

Target Alias Description ECC score Gene Family Method Actions
AT5G20830 ASUS1, atsus1, SUS1 sucrose synthase 1 0.02 OrthoFinder output from all 47 species
AT5G49190 SSA, ATSUS2, SUS2 sucrose synthase 2 0.04 OrthoFinder output from all 47 species
Als_g38079 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G000400.1 ATSUS3, SUS3,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g21034 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26886 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015018001 ATSUS4, SUS4 Carbohydrate metabolism.sucrose... 0.04 OrthoFinder output from all 47 species
GSVIVT01035106001 SSA, ATSUS2, SUS2 Carbohydrate metabolism.sucrose... 0.03 OrthoFinder output from all 47 species
Gb_12813 ATSUS3, SUS3 Sucrose synthase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp2g16060.1 ATSUS3, SUS3 sucrose synthase 0.03 OrthoFinder output from all 47 species
Nbi_g01368 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08005 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09849 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14524 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10453 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15885 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g042520.4.1 ASUS1, atsus1,... sucrose synthase 0.03 OrthoFinder output from all 47 species
Solyc12g009300.3.1 ATSUS4, SUS4,... sucrose synthase 0.03 OrthoFinder output from all 47 species
Spa_g15194 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 560 734
IPR000368 Sucrose_synth 7 555
No external refs found!