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  5. AMTR_s00106p00050320

AMTR_s00106p00050320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.28

No description available


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00050320

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00174320 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G52060 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT5G16170 No alias Core-2/I-branching... 0.04 OrthoFinder output from all 47 species
AT5G22070 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
Aev_g16602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035615 No alias not classified & original description: CDS=568-1797 0.02 OrthoFinder output from all 47 species
GSVIVT01010878001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01035340001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os02g22160.1 LOC_Os02g22160 no description available(sp|q65xs5|bc10_orysj : 129.0) 0.03 OrthoFinder output from all 47 species
LOC_Os04g20420.1 LOC_Os04g20420 no description available(sp|q65xs5|bc10_orysj : 171.0) 0.04 OrthoFinder output from all 47 species
MA_11883g0010 No alias no description available(sp|q65xs5|bc10_orysj : 160.0) 0.03 OrthoFinder output from all 47 species
MA_28957g0010 No alias no description available(sp|q65xs5|bc10_orysj : 129.0) 0.04 OrthoFinder output from all 47 species
Msp_g39137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c1_42810V3.1 Pp3c1_42810 Core-2/I-branching... 0.01 OrthoFinder output from all 47 species
Solyc02g086550.3.1 Solyc02g086550 no description available(sp|q65xs5|bc10_orysj : 491.0) 0.03 OrthoFinder output from all 47 species
Solyc03g121280.4.1 Solyc03g121280 no description available(sp|q65xs5|bc10_orysj : 145.0) 0.03 OrthoFinder output from all 47 species
Solyc05g009120.3.1 Solyc05g009120 no description available(sp|q65xs5|bc10_orysj : 165.0) 0.04 OrthoFinder output from all 47 species
Solyc11g006470.2.1 Solyc11g006470 no description available(sp|q65xs5|bc10_orysj : 96.7) 0.03 OrthoFinder output from all 47 species
Zm00001e024826_P001 Zm00001e024826 no description available(sp|q65xs5|bc10_orysj : 127.0) 0.03 OrthoFinder output from all 47 species
Zm00001e026725_P003 Zm00001e026725 no description available(sp|q65xs5|bc10_orysj : 579.0) 0.02 OrthoFinder output from all 47 species
Zm00001e029160_P001 Zm00001e029160 no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 56 320
No external refs found!