Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.41
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor
Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00106p00065610 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G56840 | No alias | myb-like transcription factor family protein | 0.05 | OrthoFinder output from all 47 species | |
| Als_g39083 | No alias | MYB-RELATED transcription factor *(MYB-R-R) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02867 | No alias | MYB-RELATED transcription factor *(MYB-R-R) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28926 | No alias | transcription factor (MYB-related) | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02805 | No alias | MYB-RELATED transcription factor *(MYB-R-R) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g096350.3.1 | Solyc03g096350 | transcription factor (MYB-related) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g076770.3.1 | Solyc06g076770 | transcription factor (MYB-related) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc08g078340.3.1 | Solyc08g078340 | transcription factor (MYB-related) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025946_P002 | Zm00001e025946 | transcription factor (MYB-related) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| No external refs found! |
