AMTR_s00106p00113330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.85

No description available


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00113330
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269120 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G77145 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Als_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026527001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g30206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006410.3.1 Solyc03g006410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!