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  5. AMTR_s00108p00058320

AMTR_s00108p00058320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00108.6

Description : Tetraspanin-6 OS=Arabidopsis thaliana


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00108p00058320
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT3G12090 TET6 tetraspanin6 0.05 OrthoFinder output from all 47 species
AT4G23410 TET5 tetraspanin5 0.04 OrthoFinder output from all 47 species
AT5G46700 TET1, TRN2 Tetraspanin family protein 0.03 OrthoFinder output from all 47 species
Adi_g012430 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016793 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021321 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Adi_g044338 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105830 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aev_g04495 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Aev_g15582 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01222 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Ala_g21756 TET1, TRN2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37511 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Als_g08927 TET10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39991 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Als_g54554 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Als_g54573 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Als_g54663 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14532 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Aob_g16586 TET10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01119 TET3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17624 TET2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39366 TET2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06740.t1 TET8, Aspi01Gene06740 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06741.t1 TET8, Aspi01Gene06741 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06742.t1 TET8, Aspi01Gene06742 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06743.t1 TET8, Aspi01Gene06743 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13775.t1 TET8, Aspi01Gene13775 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13778.t1 TET8, Aspi01Gene13778 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13779.t1 TET8, Aspi01Gene13779 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13780.t1 TET8, Aspi01Gene13780 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13781.t1 TET8, Aspi01Gene13781 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13783.t1 TET8, Aspi01Gene13783 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene27570.t1 TET8, Aspi01Gene27570 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27962.t1 TET8, Aspi01Gene27962 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49103.t1 TET8, Aspi01Gene49103 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008669 TET8 not classified & original description: CDS=387-1244 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009746 No alias not classified & original description: CDS=1-264 0.02 OrthoFinder output from all 47 species
Cba_g09358 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Cba_g68210 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Cba_g73715 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G034400.1 TET8, Ceric.09G034400 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ceric.19G060900.1 TET7, Ceric.19G060900 regulatory protein *(TET8/9) of extracellular vesicle... 0.06 OrthoFinder output from all 47 species
Ceric.23G019300.1 TET2, Ceric.23G019300 not classified & original description: pacid=50610125... 0.04 OrthoFinder output from all 47 species
Ceric.24G073900.1 TET8, Ceric.24G073900 not classified & original description: pacid=50628789... 0.03 OrthoFinder output from all 47 species
Ceric.25G029800.1 TET2, Ceric.25G029800 not classified & original description: pacid=50594048... 0.04 OrthoFinder output from all 47 species
Ceric.36G016600.1 TET8, Ceric.36G016600 not classified & original description: pacid=50568205... 0.02 OrthoFinder output from all 47 species
Dac_g10290 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Dac_g21945 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19452 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g35095 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Dcu_g47467 TET7 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Dde_g24827 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ehy_g04494 TET1, TRN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05447 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Ehy_g08971 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14453 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Ehy_g23063 TET10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25455 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016305001 No alias Tetraspanin-5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00679 TET8 Tetraspanin-8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26509 TET1, TRN2 Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g12750.1 TET2, LOC_Os02g12750 Tetraspanin-2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os06g37510.1 TET2, LOC_Os06g37510 Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g16050.1 TET8, LOC_Os08g16050 Tetraspanin-7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g25760.1 TET8, LOC_Os09g25760 Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g35980.1 TET10, LOC_Os10g35980 Tetraspanin-10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g03212 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Len_g11301 TET1, TRN2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g12644 TET2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19366 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24031 TET8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25325 TET7 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Len_g48224 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Lfl_g04600 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Lfl_g05255 TET1, TRN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27126 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Lfl_g34124 TET10 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_100296g0010 TET1, TRN2 Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10426935g0010 TET9 Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g05019 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Msp_g06754 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.06 OrthoFinder output from all 47 species
Msp_g12117 TET2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04153 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ore_g03478 TET10 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05459 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27403 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34147 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18539 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Pnu_g01963 TET2 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Pnu_g06286 TET1, TRN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09067 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Pnu_g15015 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Pnu_g18332 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c21_1270V3.1 TET8, Pp3c21_1270 tetraspanin8 0.01 OrthoFinder output from all 47 species
Ppi_g04294 TET1, TRN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15840 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Ppi_g19985 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g20123 TET4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28578 TET1, TRN2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004047 TET2 not classified & original description: CDS=106-924 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014870 TET1, TRN2 not classified & original description: CDS=1-993 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022499 TET2 not classified & original description: CDS=1-792 0.02 OrthoFinder output from all 47 species
Sam_g16136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52640 No alias regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Smo231326 TET4 Tetraspanin-3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Solyc03g059390.3.1 TET2, Solyc03g059390 Tetraspanin-2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc04g049080.4.1 TET6, Solyc04g049080 Tetraspanin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g006280.3.1 TET8, Solyc07g006280 Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g025510.4.1 TET2, Solyc07g025510 Tetraspanin-2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g080730.3.1 TET10, Solyc08g080730 Tetraspanin-10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g04269 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Spa_g09332 TET2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10210 TET7 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Spa_g13175 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Spa_g49405 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Tin_g00532 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Tin_g44827 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Zm00001e004417_P001 TET10, Zm00001e004417 Tetraspanin-10 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Zm00001e028243_P001 TET6, Zm00001e028243 Tetraspanin-6 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e029484_P001 TET6, Zm00001e029484 Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e030929_P001 TET8, Zm00001e030929 Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034206_P001 TET8, Zm00001e034206 Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e037666_P002 TET8, Zm00001e037666 Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039133_P001 TET1, TRN2,... Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 7 246
No external refs found!