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  5. AMTR_s00109p00120700

AMTR_s00109p00120700 (IAA27, PAP2,...)


Aliases : IAA27, PAP2, evm_27.TU.AmTr_v1.0_scaffold00109.120

Description : Auxin-responsive protein IAA8 OS=Arabidopsis thaliana


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00120700
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G04250 AXR3, IAA17 AUX/IAA transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
AT2G22670 IAA8 indoleacetic acid-induced protein 8 0.03 OrthoFinder output from all 47 species
AT3G15540 MSG2, IAA19 indole-3-acetic acid inducible 19 0.04 OrthoFinder output from all 47 species
AT4G14550 SLR, IAA14 indole-3-acetic acid inducible 14 0.03 OrthoFinder output from all 47 species
AT4G28640 IAA11 indole-3-acetic acid inducible 11 0.03 OrthoFinder output from all 47 species
AT4G32280 IAA29 indole-3-acetic acid inducible 29 0.03 OrthoFinder output from all 47 species
Ala_g06542 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20366 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30890 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20549.t1 MSG2, IAA19,... transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61410.t1 IAA8, Aspi01Gene61410 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G029200.1 IAA8, Ceric.12G029200 transcriptional repressor *(IAA/AUX) & original... 0.06 OrthoFinder output from all 47 species
Dac_g26412 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44534 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g19267 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g18360.1 IAA31, LOC_Os01g18360 Auxin-responsive protein IAA4 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os03g43410.1 IAA4, ATAUX2-11,... Auxin-responsive protein IAA12 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os05g44810.2 PAP1, IAA26,... repressor component Aux/IAA of auxin receptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g40900.1 IAA4, ATAUX2-11,... Auxin-responsive protein IAA31 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Lfl_g30688 PAP1, IAA26 transcriptional repressor *(IAA/AUX) & original description: none 0.06 OrthoFinder output from all 47 species
MA_38g0010 IAA27, PAP2 Auxin-responsive protein IAA27 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_608803g0010 IAA16 Auxin-responsive protein IAA16 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8842034g0010 IAA13 Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g14922 SLR, IAA14 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18097 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33560 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016613 IAA8 transcriptional repressor *(IAA/AUX) & original... 0.03 OrthoFinder output from all 47 species
Smo85035 IAA16 Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc03g121060.4.1 PAP1, IAA26,... repressor component Aux/IAA of auxin receptor complex 0.03 OrthoFinder output from all 47 species
Solyc05g008850.4.1 IAA32, MEE10,... Auxin-responsive protein IAA32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g084070.3.1 IAA4, ATAUX2-11,... Auxin-responsive protein IAA4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g064530.3.1 IAA13, Solyc09g064530 Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g08516 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08517 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10685 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011863_P002 IAA3, SHY2,... Auxin-responsive protein IAA24 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e018054_P001 IAA4, ATAUX2-11,... Auxin-responsive protein IAA31 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR003311 AUX_IAA 45 339
No external refs found!