1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00109p00128740

AMTR_s00109p00128740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.132

Description : L-gulonolactone oxidase 3 OS=Arabidopsis thaliana


Gene families : OG0000286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00128740
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT2G46760 No alias D-arabinono-1,4-lactone oxidase family protein 0.06 OrthoFinder output from all 47 species
AT5G11540 No alias D-arabinono-1,4-lactone oxidase family protein 0.03 OrthoFinder output from all 47 species
Adi_g124511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125668 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g35322 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Ala_g24678 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Als_g12372 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Als_g40192 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.04 OrthoFinder output from all 47 species
Aob_g29253 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Aob_g29254 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69235.t1 Aspi01Gene69235 L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012250 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z132600.1 Ceric.1Z132600 L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11224 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g48487 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Gb_24045 No alias L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_31377 No alias L-gulonolactone oxidase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g49360.1 LOC_Os01g49360 L-gulonolactone oxidase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g03200.1 LOC_Os02g03200 L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g07974 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Len_g40629 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Len_g50887 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
MA_10427676g0020 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_123068g0010 No alias Probable L-gulonolactone oxidase 6 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_47198g0010 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp6g06140.1 No alias L-gulonolactone oxidase 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g26525 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Msp_g34645 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Ore_g19484 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Ore_g20396 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Pir_g26343 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.04 OrthoFinder output from all 47 species
Pir_g35187 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Pir_g48194 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g04552 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g60281 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Smo123507 No alias L-gulonolactone oxidase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc08g068420.3.1 Solyc08g068420 L-gulonolactone oxidase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g30032 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Tin_g14165 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.02 OrthoFinder output from all 47 species
Tin_g45654 No alias L-gulono-1,4-lactone oxidase *(GULLO) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003069_P001 Zm00001e003069 L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004321_P001 Zm00001e004321 Probable L-gulonolactone oxidase 6 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e014133_P001 Zm00001e014133 L-gulonolactone oxidase 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e021853_P001 Zm00001e021853 L-gulonolactone oxidase 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEA Interproscan
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 55 186
IPR007173 ALO_C 416 521
No external refs found!