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  5. AMTR_s00111p00054240

AMTR_s00111p00054240 (ATJ3, ATJ,...)


Aliases : ATJ3, ATJ, evm_27.TU.AmTr_v1.0_scaffold00111.26

Description : DnaJ protein homolog 2 OS=Allium porrum


Gene families : OG0000480 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00054240
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Adi_g055595 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076342 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05672 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03782 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11180 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014046 ATJ3, ATJ not classified & original description: CDS=645-1739 0.03 OrthoFinder output from all 47 species
Cba_g05119 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07885 ATJ3, ATJ not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09480 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G058000.1 ATJ3, ATJ,... co-chaperone *(Hsp40) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g35892 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02146 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034612001 J2, ATJ2 DnaJ protein homolog OS=Cucumis sativus 0.03 OrthoFinder output from all 47 species
LOC_Os02g43930.1 ATJ3, ATJ, LOC_Os02g43930 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
LOC_Os03g44620.2 ATJ3, ATJ, LOC_Os03g44620 co-chaperone (Hsp40) 0.08 OrthoFinder output from all 47 species
Len_g08613 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05408 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21820 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427579g0030 ATJ3, ATJ DnaJ protein homolog OS=Cucumis sativus... 0.02 OrthoFinder output from all 47 species
Nbi_g02901 J2, ATJ2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15965 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g055160.3.1 J2, ATJ2, Solyc05g055160 co-chaperone (Hsp40) 0.05 OrthoFinder output from all 47 species
Solyc11g006460.3.1 J2, ATJ2, Solyc11g006460 co-chaperone (Hsp40) 0.07 OrthoFinder output from all 47 species
Spa_g29177 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42356 ATJ3, ATJ co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005000_P002 J2, ATJ2, Zm00001e005000 co-chaperone (Hsp40) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 14 71
IPR002939 DnaJ_C 219 279
IPR001305 HSP_DnaJ_Cys-rich_dom 147 213
No external refs found!