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  5. AMTR_s00111p00072510

AMTR_s00111p00072510 (DUO1,...)


Aliases : DUO1, evm_27.TU.AmTr_v1.0_scaffold00111.43

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00072510

Target Alias Description ECC score Gene Family Method Actions
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.02 OrthoFinder output from all 47 species
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.02 OrthoFinder output from all 47 species
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.03 OrthoFinder output from all 47 species
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.02 OrthoFinder output from all 47 species
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.03 OrthoFinder output from all 47 species
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.03 OrthoFinder output from all 47 species
Als_g07622 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001484 AtMYB85, MYB85 not classified & original description: CDS=1-468 0.03 OrthoFinder output from all 47 species
Ceric.05G075100.1 AtMYB20, MYB20,... MYB class-R2R3 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G025800.1 AtMYB97, MYB97,... MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ceric.25G018100.1 MYB103,... not classified & original description: pacid=50594460... 0.03 OrthoFinder output from all 47 species
Dac_g09953 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16845 ATMYB61, MYB61 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14863 AtMYB83, MYB83 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017716001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
LOC_Os01g03720.1 BW62B, BW62C,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g56090.1 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_10431212g0010 MYB103, AtMYB103 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
MA_179894g0010 ATMYB12, PFG1, MYB12 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Nbi_g34033 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23905 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo98669 ATMYB5, MYB5 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc02g089190.2.1 MYB121,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc09g090790.3.1 MYB305, ATMYB71,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Spa_g37891 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013452_P001 MYB19, AtMYB19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e034118_P001 ATMYB94,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e037956_P001 ATMYB94,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 65 105
No external refs found!