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  5. AMTR_s00112p00047400

AMTR_s00112p00047400 (AtGH9B8, GH9B8,...)


Aliases : AtGH9B8, GH9B8, evm_27.TU.AmTr_v1.0_scaffold00112.11

Description : Endoglucanase 11 OS=Arabidopsis thaliana


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00112p00047400

Target Alias Description ECC score Gene Family Method Actions
AT2G32990 AtGH9B8, GH9B8 glycosyl hydrolase 9B8 0.02 OrthoFinder output from all 47 species
AT2G44570 GH9B12, AtGH9B12 glycosyl hydrolase 9B12 0.02 OrthoFinder output from all 47 species
Als_g13752 ATCEL2, CEL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70443 AtGH9A4, GH9A4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23390.t1 AtGH9A4, GH9A4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71907.t2 AtGH9C3, GH9C3,... class-C endo-1,4-beta-glucanase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000700 GH9B14, AtGH9B14 not classified & original description: CDS=1-1683 0.04 OrthoFinder output from all 47 species
Ceric.09G023300.1 AtGH9C3, GH9C3,... class-C endo-1,4-beta-glucanase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g08349 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10899 AtGH9A4, GH9A4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01526 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019523001 GH9C2, AtGH9C2 Endoglucanase 6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01032798001 GH9B10, AtGH9B10 Endoglucanase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g50490.1 AtGH9B8, GH9B8,... Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Lfl_g14230 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.02 OrthoFinder output from all 47 species
MA_140507g0010 CEL1, GH9B1, ATGH9B1 Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_74652g0010 CEL1, GH9B1, ATGH9B1 Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g36183 AtGH9B8, GH9B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43287 AtGH9A4, GH9A4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45091 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18085 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62195 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63529 GH9C2, AtGH9C2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo234652 GH9C2, AtGH9C2 Endoglucanase 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc12g055980.1.1 GH9C2, AtGH9C2,... Endoglucanase 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013509_P001 ATCEL2, CEL2,... Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e015739_P002 CEL1, GH9B1,... Endoglucanase 6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e026066_P002 AtGH9C3, GH9C3,... Endoglucanase 2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e026190_P002 AtGH9B13,... Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e030964_P003 CEL1, GH9B1,... Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 36 498
No external refs found!