AMTR_s00112p00127430 (PUX4,...)


Aliases : PUX4, evm_27.TU.AmTr_v1.0_scaffold00112.34

Description : Plant UBX domain-containing protein 4 OS=Arabidopsis thaliana


Gene families : OG0003606 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003606_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00112p00127430

Target Alias Description ECC score Gene Family Method Actions
Adi_g008882 PUX4 substrate-to-CDC48 bridging factor *(PUX3/4/5) &... 0.03 OrthoFinder output from all 47 species
LOC_Os04g39040.1 PUX4, LOC_Os04g39040 Plant UBX domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g05541 PUX4 substrate-to-CDC48 bridging factor *(PUX3/4/5) &... 0.03 OrthoFinder output from all 47 species
Smo183048 PUX3 Plant UBX domain-containing protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012989 SEP_domain 182 255
IPR001012 UBX_dom 290 367
No external refs found!