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  5. AMTR_s00116p00067970

AMTR_s00116p00067970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00116.6

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP14 component


Gene families : OG0005482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00116p00067970

Target Alias Description ECC score Gene Family Method Actions
Adi_g093969 No alias component *(SRP14) of SRP (signal recognition particle)... 0.03 OrthoFinder output from all 47 species
Aop_g01892 No alias component *(SRP14) of SRP (signal recognition particle)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.15 No alias Protein translocation.endoplasmic... 0.01 OrthoFinder output from all 47 species
Dac_g00223 No alias component *(SRP14) of SRP (signal recognition particle)... 0.03 OrthoFinder output from all 47 species
Dcu_g11577 No alias component *(SRP14) of SRP (signal recognition particle)... 0.02 OrthoFinder output from all 47 species
Zm00001e006890_P001 Zm00001e006890 component SRP14 of SRP (signal recognition particle) complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
MF GO:0030942 endoplasmic reticulum signal peptide binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003210 Signal_recog_particle_SRP14 4 92
No external refs found!