1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00119p00074870

AMTR_s00119p00074870 (MIF2,...)


Aliases : MIF2, evm_27.TU.AmTr_v1.0_scaffold00119.54

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor


Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00074870
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.07 OrthoFinder output from all 47 species
AT1G14440 AtHB31, ZHD4, HB31 homeobox protein 31 0.03 OrthoFinder output from all 47 species
AT1G74660 MIF1 mini zinc finger 1 0.05 OrthoFinder output from all 47 species
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.03 OrthoFinder output from all 47 species
AT2G02540 ZHD3, HB21, ATHB21, ZFHD4 homeobox protein 21 0.03 OrthoFinder output from all 47 species
AT3G28917 MIF2 mini zinc finger 2 0.06 OrthoFinder output from all 47 species
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.04 OrthoFinder output from all 47 species
Adi_g062971 AtHB33, ZHD5, HB33 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03921 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05436 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07790 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10854 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11999 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09523 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31503 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g08358 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18764 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04717 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20738 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04847.t1 ATHB22, MEE68,... zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22700.t1 AtHB24, ZHD6,... zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59294.t1 ATHB22, MEE68,... zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07428 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12626 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g57687 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G025400.1 AtHB31, ZHD4,... zf-HD-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.04G054700.1 AtHB31, ZHD4,... zf-HD-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G036600.1 AtHB31, ZHD4,... zf-HD-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g03700 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13123 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07627 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03341 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07379 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31638 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01009128001 ATHB22, MEE68, ZHD2, HB22 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01012772001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Gb_15163 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Gb_18045 AtHB31, ZHD4, HB31 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Gb_30985 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47770.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
LOC_Os08g37400.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
LOC_Os09g24810.1 LOC_Os09g24810 transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
LOC_Os09g29130.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
LOC_Os11g13930.1 AtHB31, ZHD4,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
LOC_Os12g03110.1 MIF2, LOC_Os12g03110 transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
Lfl_g01377 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14735 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19325 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30980 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_101972g0010 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_12314g0010 MIF2 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
MA_171206g0010 MIF2 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
MA_173815g0010 MIF2 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
MA_19630g0030 AtHB31, ZHD4, HB31 transcription factor (zf-HD) 0.05 OrthoFinder output from all 47 species
MA_32594g0010 MIF2 transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
MA_453742g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11371 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01020 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04103 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g35218 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03609 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10866 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35239 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26146 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59877 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02734 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13743 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16107 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00560 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02885 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10930 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11969 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013539 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025357 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g34751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo111756 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Solyc01g150154.1.1 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Solyc01g150155.1.1 Solyc01g150155 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Solyc02g067330.1.1 MIF2, Solyc02g067330 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Solyc02g087970.1.1 MIF2, Solyc02g087970 transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
Solyc03g116070.1.1 MIF3, Solyc03g116070 transcription factor (zf-HD) 0.08 OrthoFinder output from all 47 species
Solyc04g074990.3.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Solyc05g007580.1.1 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Spa_g49192 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50082 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50573 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51193 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51319 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55829 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05939 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14946 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008082_P001 AtHB31, ZHD4,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Zm00001e009830_P001 HB34, ZHD9,... transcription factor (zf-HD) 0.04 OrthoFinder output from all 47 species
Zm00001e015590_P001 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Zm00001e018364_P001 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Zm00001e021292_P003 AtHB31, ZHD4,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Zm00001e023331_P001 ATHB22, MEE68,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species
Zm00001e034119_P001 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 87 141
No external refs found!