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  5. AMTR_s00119p00105590

AMTR_s00119p00105590 (LOF2, MYB105,...)


Aliases : LOF2, MYB105, ATMYB105, evm_27.TU.AmTr_v1.0_scaffold00119.82

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00105590

Target Alias Description ECC score Gene Family Method Actions
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.02 OrthoFinder output from all 47 species
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.02 OrthoFinder output from all 47 species
AT5G58850 ATMYB119, MYB119 myb domain protein 119 0.02 OrthoFinder output from all 47 species
Aev_g39348 MYB3R-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33950 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12553 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Als_g28391 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene69491.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Cre03.g197100 ATMYB119, MYB119 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Len_g56915 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20709 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080580.4.1 MYB3R-1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 138 183
IPR001005 SANT/Myb 190 233
No external refs found!