AMTR_s00121p00111530 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00121.23

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase

Gene families : OG0000894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000894_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00121p00111530
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
Gb_01738	No alias	Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp4g13950.1	No alias	Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Nbi_g19388	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
MF	GO:0004559	alpha-mannosidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006013	mannose metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0015923	mannosidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011682	Glyco_hydro_38_C	460	972
IPR015341	Glyco_hydro_38_cen	378	400
IPR015341	Glyco_hydro_38_cen	356	377
IPR000602	Glyco_hydro_38_N	39	350

External Links

No external refs found!