AMTR_s00122p00121750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00122.60

No description available


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00121750
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00260120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g74600,... 0.04 OrthoFinder output from all 47 species
Ala_g16530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06902 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17095 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16552.t1 EMB2261, Aspi01Gene16552 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16559.t1 EMB2261, Aspi01Gene16559 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36735.t1 Aspi01Gene36735 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013171 SLO1 not classified & original description: CDS=1-1446 0.02 OrthoFinder output from all 47 species
Azfi_s0444.g070598 EMB2758 not classified & original description: CDS=1-1605 0.02 OrthoFinder output from all 47 species
Azfi_s0889.g091250 No alias not classified & original description: CDS=1-2652 0.02 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.01 OrthoFinder output from all 47 species
Cre01.g025950 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dac_g30285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40867 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g05942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008715001 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.01 OrthoFinder output from all 47 species
LOC_Os09g34870.1 LOC_Os09g34870 Pentatricopeptide repeat-containing protein At2g36980,... 0.01 OrthoFinder output from all 47 species
Msp_g20742 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019756 No alias not classified & original description: CDS=1-2544 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023182 No alias not classified & original description: CDS=1-4812 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0345.g027287 No alias not classified & original description: CDS=1-2001 0.02 OrthoFinder output from all 47 species
Smo98551 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008517 folic acid transmembrane transporter activity IEP HCCA
MF GO:0008518 folate:monoatomic anion antiporter activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
MF GO:0072349 modified amino acid transmembrane transporter activity IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!