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  5. AMTR_s00126p00123680

AMTR_s00126p00123680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00126.61

Description : Calmodulin-like protein 1 OS=Arabidopsis thaliana


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00126p00123680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00030040 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Adi_g057947 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081283 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43414 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11000 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34152 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57972 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10189 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40092.t2 Aspi01Gene40092 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40436.t1 TCH2, CML24,... calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G070300.1 Ceric.15G070300 calcium sensor *(CML) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G030200.1 Ceric.18G030200 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g07712 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02760 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14256 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_37767 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os12g04360.1 LOC_Os12g04360 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g13533 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22368 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Pnu_g21746 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27722 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005370.3.1 Solyc01g005370 Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 80 137
IPR011992 EF-hand-dom_pair 2 65
No external refs found!