Aliases : WLIM1
Description : LIM-type transcription factor & original description: none
Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g07526 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g106596 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g21872 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g18170 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05610 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39322 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007812001 | WLIM1 | RNA biosynthesis.transcriptional activation.LIM... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01026849001 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g42820.1 | LOC_Os02g42820 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g45010.1 | LOC_Os04g45010 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g55723 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_104604g0010 | WLIM1 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| MA_20195g0010 | WLIM1 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g40386 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g21254 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g00389 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g33744 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001741 | WLIM1 | LIM-type transcription factor & original description: CDS=1-612 | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029431_P002 | WLIM1, Zm00001e029431 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| No external refs found! |
