Aliases : LRL1, evm_27.TU.AmTr_v1.0_scaffold00129.99
Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G42300 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10601 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036227 | LRL1 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g12940.1 | LOC_Os03g12940 | transcription factor (bHLH). component FBX of SCF E3... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g45935 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_17000V3.1 | LRL1, Pp3c17_17000 | LJRHL1-like 1 | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g14538 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40903 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | HCCA |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | HCCA |
| MF | GO:0008409 | 5'-3' exonuclease activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
| BP | GO:0022406 | membrane docking | IEP | HCCA |
| CC | GO:0030904 | retromer complex | IEP | HCCA |
| BP | GO:0048278 | vesicle docking | IEP | HCCA |
| BP | GO:0051640 | organelle localization | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140029 | exocytic process | IEP | HCCA |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 324 | 369 |
| No external refs found! |
