AMTR_s00130p00102230 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00130.48

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein

Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00130p00102230

Target	Alias	Description	ECC score	Gene Family Method
AT1G21380	No alias	Target of Myb protein 1	0.02	OrthoFinder output from all 47 species
AT1G76970	No alias	Target of Myb protein 1	0.03	OrthoFinder output from all 47 species
Aev_g24289	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g27083	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g36646	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0045.g030003	No alias	ubiquitin adaptor protein *(TOL) & original description:...	0.05	OrthoFinder output from all 47 species
Azfi_s0401.g068259	No alias	ubiquitin adaptor protein *(TOL) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.35G060000.1	Ceric.35G060000	ubiquitin adaptor protein *(TOL) & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g07056	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014122001	No alias	Vesicle trafficking.endomembrane trafficking.protein...	0.05	OrthoFinder output from all 47 species
GSVIVT01030233001	No alias	Vesicle trafficking.endomembrane trafficking.protein...	0.03	OrthoFinder output from all 47 species
LOC_Os05g39760.1	LOC_Os05g39760	TOM endomembrane trafficking associated protein	0.02	OrthoFinder output from all 47 species
Ore_g12339	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g097070.3.1	Solyc03g097070	TOM endomembrane trafficking associated protein	0.02	OrthoFinder output from all 47 species
Solyc04g063280.3.1	Solyc04g063280	TOM endomembrane trafficking associated protein	0.02	OrthoFinder output from all 47 species
Solyc08g068370.3.1	Solyc08g068370	TOM endomembrane trafficking associated protein	0.03	OrthoFinder output from all 47 species
Solyc09g025240.3.1	Solyc09g025240	TOM endomembrane trafficking associated protein	0.03	OrthoFinder output from all 47 species
Spa_g16950	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e031531_P003	Zm00001e031531	TOM1-like protein 6 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004556	alpha-amylase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002014	VHS_dom	3	115
IPR004152	GAT_dom	189	271

External Links

No external refs found!

AMTR_s00130p00102230 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation