Aliases : LBD39, evm_27.TU.AmTr_v1.0_scaffold00137.18
Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G68510 | LBD42 | LOB domain-containing protein 42 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G67420 | LBD37, ASL39 | LOB domain-containing protein 37 | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g06478 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g11822 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18542 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G017400.1 | LBD38, Ceric.08G017400 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z284100.1 | LBD38, Ceric.1Z284100 | not classified & original description: pacid=50628197... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g15482 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000141001 | LBD38 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011896001 | LBD42 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g03890.1 | LBD41, LOC_Os01g03890 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g20800.1 | LOC_Os01g20800 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g32770.1 | LBD41, LOC_Os01g32770 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_19934g0010 | LBD40 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_223267g0010 | LBD40 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_70989g0010 | LBD40 | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g01919 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47667 | LBD41 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018895 | LBD38 | AS2/LOB-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g107190.3.1 | LBD37, ASL39,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g077990.3.1 | LBD38, Solyc04g077990 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027417_P001 | LBD41, Zm00001e027417 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032150_P001 | LBD41, Zm00001e032150 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 2 | 104 |
| No external refs found! |
