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  5. AMTR_s00140p00036970

AMTR_s00140p00036970 (ADF8,...)


Aliases : ADF8, evm_27.TU.AmTr_v1.0_scaffold00140.10

Description : Cytoskeleton.microfilament network.actin polymerisation.cofilin-like actin depolymerizing factor


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00140p00036970
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G01750 ADF11 actin depolymerizing factor 11 0.03 OrthoFinder output from all 47 species
AT2G16700 ADF5, ATADF5 actin depolymerizing factor 5 0.03 OrthoFinder output from all 47 species
AT4G25590 ADF7 actin depolymerizing factor 7 0.04 OrthoFinder output from all 47 species
AT5G52360 ADF10 actin depolymerizing factor 10 0.03 OrthoFinder output from all 47 species
Adi_g018986 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077743 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18409 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28084 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009152 ADF7 actin-depolymerizing factor & original description: CDS=19-414 0.03 OrthoFinder output from all 47 species
Ceric.13G071300.1 ADF8, Ceric.13G071300 actin-depolymerizing factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g34893 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026879001 ADF11 Cytoskeleton.microfilament network.actin... 0.06 OrthoFinder output from all 47 species
GSVIVT01028324001 ADF6, ATADF6 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028963001 ADF7 Cytoskeleton.microfilament network.actin... 0.07 OrthoFinder output from all 47 species
Gb_09280 ADF6, ATADF6 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
LOC_Os02g44470.1 ADF11, LOC_Os02g44470 actin-depolymerizing factor 0.04 OrthoFinder output from all 47 species
LOC_Os04g46910.1 ADF7, LOC_Os04g46910 actin-depolymerizing factor 0.04 OrthoFinder output from all 47 species
Lfl_g05171 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g005360.3.1 ADF2, Solyc06g005360 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Solyc10g017550.4.1 ADF11, Solyc10g017550 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Zm00001e023183_P001 ADF7, Zm00001e023183 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Zm00001e034985_P001 ADF11, Zm00001e034985 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 12 136
No external refs found!