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  5. AMTR_s00140p00103640

AMTR_s00140p00103640 (RPL9,...)


Aliases : RPL9, evm_27.TU.AmTr_v1.0_scaffold00140.50

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL9 component


Gene families : OG0005681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00140p00103640

Target Alias Description ECC score Gene Family Method Actions
AT3G44890 RPL9 ribosomal protein L9 0.05 OrthoFinder output from all 47 species
Als_g00418 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aob_g29870 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Azfi_s0116.g046443 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g11053 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g02133 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01031460001 RPL9 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os02g57670.1 RPL9, LOC_Os02g57670 component psRPL9 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
MA_8767694g0010 RPL9 component psRPL9 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp1g05730.1 RPL9 component psRPL9 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Pnu_g10443 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c1_5320V3.1 RPL9, Pp3c1_5320 ribosomal protein L9 0.02 OrthoFinder output from all 47 species
Ppi_g00398 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008686 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Tin_g00502 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e016155_P002 RPL9, Zm00001e016155 component psRPL9 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR020070 Ribosomal_L9_N 15 60
IPR020069 Ribosomal_L9_C 75 160
No external refs found!