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  5. AMTR_s00142p00041710

AMTR_s00142p00041710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.18

Description : Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00041710

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00123080 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G12280 No alias LRR and NB-ARC domains-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Aspi01Gene55099.t1 ZAR1, Aspi01Gene55099 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017229001 RPS5 Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017267001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01020273001 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
GSVIVT01020278001 RPS5 Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01038446001 No alias Probable disease resistance protein At1g52660... 0.04 OrthoFinder output from all 47 species
Gb_01077 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_24897 No alias Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
LOC_Os12g10410.1 RPS2, LOC_Os12g10410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_10432620g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10436967g0010 RPS5 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_112657g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_14682g0010 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
MA_166614g0010 No alias Probable disease resistance protein At5g63020... 0.04 OrthoFinder output from all 47 species
MA_168565g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_378728g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_48202g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_526361g0010 RPS5 Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
MA_5270774g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5551624g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_733g0010 No alias Probable disease resistance protein At1g15890... 0.02 OrthoFinder output from all 47 species
MA_91465g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pp3c19_2480V3.1 Pp3c19_2480 NB-ARC domain-containing disease resistance protein 0.01 OrthoFinder output from all 47 species
Smo105865 No alias Probable disease resistance protein At4g33300... 0.02 OrthoFinder output from all 47 species
Solyc02g037540.3.1 Solyc02g037540 Probable disease resistance protein At4g27220... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 158 354
No external refs found!