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  5. AMTR_s00147p00033730

AMTR_s00147p00033730 (NIP4;2, NLM5,...)


Aliases : NIP4;2, NLM5, evm_27.TU.AmTr_v1.0_scaffold00147.12

Description : Solute transport.channels.MIP family.Nodulin-26-like intrinsic protein (NIP-type)


Gene families : OG0000311 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00147p00033730
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G80760 NIP6, NIP6;1, NLM7 NOD26-like intrinsic protein 6;1 0.04 OrthoFinder output from all 47 species
AT3G06100 NIP7;1, NLM6, NLM8 NOD26-like intrinsic protein 7;1 0.03 OrthoFinder output from all 47 species
AT4G10380 NIP5;1, NLM6, NLM8 NOD26-like intrinsic protein 5;1 0.04 OrthoFinder output from all 47 species
AT5G37820 NIP4;2, NLM5 NOD26-like intrinsic protein 4;2 0.04 OrthoFinder output from all 47 species
Aev_g19720 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g70030 NIP4;2, NLM5 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Dde_g46159 NIP7;1, NLM6, NLM8 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017896001 NIP7;1, NLM6, NLM8 Solute transport.channels.MIP family.Nodulin-26-like... 0.04 OrthoFinder output from all 47 species
Gb_09252 NIP7;1, NLM6, NLM8 Nodulin-26-like intrinsic protein (NIP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51110.1 NIP4;1, NLM4,... Nodulin-26-like intrinsic protein (NIP) 0.02 OrthoFinder output from all 47 species
Len_g09604 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Len_g37948 AT-NLM1, ATNLM1,... Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Len_g57179 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Mp8g11200.1 NIP4;1, NLM4 Nodulin-26-like intrinsic protein (NIP) 0.04 OrthoFinder output from all 47 species
Nbi_g30926 NIP7;1, NLM6, NLM8 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g10544 NIP7;1, NLM6, NLM8 Nodulin-26-like intrinsic protein *(NIP) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001999 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.03 OrthoFinder output from all 47 species
Spa_g46866 NIP7;1, NLM6, NLM8 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 35 243
No external refs found!