AMTR_s00147p00091670 (HSP60, HSP60-3B,...)

Aliases : HSP60, HSP60-3B, evm_27.TU.AmTr_v1.0_scaffold00147.48

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein

Gene families : OG0001609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00147p00091670

Target	Alias	Description	ECC score	Gene Family Method
Adi_g011946	HSP60, HSP60-3B	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g020511	HSP60, HSP60-3B	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g054886	HSP60-2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g078675	HSP60, HSP60-3B	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g117647	HSP60, HSP60-3B	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g02162	HSP60, HSP60-3B	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.25G075100.1	HSP60, HSP60-3B,...	chaperone *(Hsp60) & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g11411	HSP60, HSP60-3B	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g10198	HSP60, HSP60-3B	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g11889	HSP60, HSP60-3B	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g40992	HSP60, HSP60-3B	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g53856	HSP60-2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g10343	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06599	HSP60, HSP60-3B	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	38	539

External Links

No external refs found!

AMTR_s00147p00091670 (HSP60, HSP60-3B,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation